Software & AppsOperating SystemLinux

How To Open DICOM Files on Ubuntu

Ubuntu 13

Digital Imaging and Communications in Medicine (DICOM) is a standard for transmitting, storing, retrieving, printing, and sharing medical images. DICOM files can be exchanged between two entities that are capable of receiving image and patient data in DICOM format. In this article, we will explore various methods to open DICOM files on Ubuntu.

Quick Answer

To open DICOM files on Ubuntu, you can use DICOMscope, Ginkgo CADx, Aeskulap, Weasis, GIMP, Aliza, InVesalius, or Python with the pydicom package. Each tool has its own features and limitations, so it’s recommended to try different viewers to find the one that suits your needs.

DICOMscope

DICOMscope is a free DICOM viewer that can display uncompressed, monochrome DICOM images from all modalities. It also supports monitor calibration according to DICOM part 14.

To install DICOMscope, you need to run the following command in your terminal:

sudo apt install dicomscope

In this command, sudo is used to execute the command with root privileges, apt is the package handling utility in Ubuntu, install is the command to install a new package, and dicomscope is the name of the package you want to install.

Ginkgo CADx

Ginkgo CADx is an advanced DICOM viewer and dicomizer. It can convert various image formats to DICOM and provides a range of features.

To install Ginkgo CADx, run the following command:

sudo apt install ginkgocadx

Aeskulap

Aeskulap is a medical image viewer designed to load and review DICOM images. It can also query and fetch DICOM images from archive nodes.

To install Aeskulap, run the following command:

sudo apt install aeskulap

Weasis

Weasis is a cross-platform DICOM viewer that supports various DICOM file types, including JPEG2000 compressed files. It offers a wide range of features such as measurement tools, 2D/3D views, and support for different image formats.

You can install Weasis from Flathub or visit their website for more information.

GIMP

GIMP (GNU Image Manipulation Program) can also open DICOM images. However, it may only load the first frame of a multi-frame image.

To install GIMP, run the following command:

sudo apt install gimp

Aliza

Aliza is a DICOM viewer available on Flathub. It has both a free and non-free version. The source code for the free version is hosted on GitHub.

InVesalius

InVesalius is a 3D medical imaging reconstruction software that generates 3D reconstructions based on a sequence of 2D DICOM files. It supports various DICOM file formats and provides tools for image manipulation, segmentation, measurement, and more.

You can find InVesalius on GitHub or install it from Flathub.

Using Python and pydicom

If you prefer to work with Python, you can use the pydicom package to manipulate DICOM files programmatically. Pydicom allows you to read, modify, and write DICOM data using Python.

To install pydicom, run the following command:

pip install pydicom

In this command, pip is the package installer for Python, and install is the command to install a new package.

Conclusion

There are several ways to open DICOM files on Ubuntu. Some DICOM viewers may have limitations with certain file formats or features. It’s recommended to try different viewers to find the one that works best for your specific DICOM files. Always remember to check the documentation of each tool for more detailed information and usage instructions.

Can I open DICOM files on Ubuntu without installing any additional software?

No, you will need to install a DICOM viewer or use a software library to open DICOM files on Ubuntu.

Can I use GIMP to view all frames of a multi-frame DICOM image?

No, GIMP may only load the first frame of a multi-frame DICOM image.

Can I use pydicom to modify DICOM files?

Yes, pydicom allows you to read, modify, and write DICOM data using Python.

Can I use Aeskulap to retrieve DICOM images from archive nodes?

Yes, Aeskulap can query and fetch DICOM images from archive nodes.

Can I use Weasis to view JPEG2000 compressed DICOM files?

Yes, Weasis supports various DICOM file types, including JPEG2000 compressed files.

Can I use Ginkgo CADx to convert image formats to DICOM?

Yes, Ginkgo CADx can convert various image formats to DICOM.

Can I use DICOMscope to calibrate my monitor according to DICOM part 14?

Yes, DICOMscope supports monitor calibration according to DICOM part 14.

Can I use Aliza to view DICOM files on Ubuntu?

Yes, Aliza is a DICOM viewer available on Flathub.

Can I use InVesalius to generate 3D reconstructions from DICOM files?

Yes, InVesalius is a 3D medical imaging reconstruction software that can generate 3D reconstructions based on a sequence of 2D DICOM files.

Can I install DICOMscope, Ginkgo CADx, Aeskulap, and GIMP from the Ubuntu Software Center?

Yes, you can search for and install these DICOM viewers from the Ubuntu Software Center.

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